fluttermoth said:
Are you sure the tank is properly cycled, OP? Have you tested for ammonia/nitrite?
You would have to have a seriously strong filter to suck up healthy fry; normally when fish get stuck on filters, it's because they were already sick and didn't have the strength to swim away.
+1 I've kept and keep fry with way stronger flow than the OP's and they aren't bothered one bit.
Sick or dead fry/fish on another hand can get stuck to the intake or if the holes are big, it will suck them up altogether because that's what filters do ideally, clean the water not only biologically but mechanically too, removing floating lifeless pieces and other stuff.
On another hand, any fish can decide to take an adventurous swim up the intake if the holes/cuts are big enough to let it swim through. That's why with fry, small fish, thin fish like khuli loaches for example one uses sponges on the intakes or similar stuff to prevent them swimming into the wrong compartment that can potentially kill them.
Just make sure the fry are in a well cycled, filtered tank. The food that fry need to grow healthy and at a good rate is quite enough to cause deadly spikes in an unfiltered/uncycled tank or underfiltered tank. So downgrading a filter/reducing the flow of a filter or not running the filter constantly is actually not recommended.
Make sure there's water surface movement because that's the only way to get the slow dissolving oxygen into the water. The higher the water temperature, the more oxygenation should be provided, whether via more turbulent surface movement or extra devices like air pumps, etc..
Cover the intakes if the holes are big for the fry to swim through but I'd suggest a coarse sponge instead of mesh because the latter stuff seems to cripple the filters in time, reducing the flow to nothing. Do daily big water changes and feed the fry with variety of foods. Make sure they get some light too daily, even if it's room light. The higher the temperature, the faster the metabolism, so the more the fry will eat and the faster they'll grow. Therefore for many species it's common to keep the tank in slightly warmer conditions than what the parents require, hence using a heater in a fry tank is best.
Good luck with your fry.